BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B12LP1|AL425993
(764 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1406 0.0
>3x_Contig1619
Length = 7770
Score = 1406 bits (702), Expect = 0.0
Identities = 745/766 (97%), Gaps = 3/766 (0%)
Strand = Plus / Minus
Query: 1 gatctgtagcttaatagtaaagtcccatcttgtcacgatggttgatgtcagtgcaagtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5918 gatctgtagcttaatagtaaagtcccatcttgtcacgatggttgatgtcagtgcaagtct 5859
Query: 61 gattagattcgtaataggaaaattcactattggtaaggtagattatttgctacataattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5858 gattagattcgtaataggaaaattcactattggtaaggtagattatttgctacataattg 5799
Query: 121 aactatgttcttatgagttcgactctcatattttccgttcatttttctatatttttatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5798 aactatgttcttatgagttcgactctcatattttccgttcatttttctatatttttatat 5739
Query: 181 ataattataggtgaatatatttcaaaggtagaaagaatgcttgtggcgcgttaaatctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5738 ataattataggtgaatatatttcaaaggtagaaagaatgcttgtggcgcgttaaatctga 5679
Query: 241 gttcaattctcagtattcaccctttgccccaaatgcgacatcctcatagggatgatgcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5678 gttcaattctcagtattcaccctttgccccaaatgcgacatcctcatagggatgatgcat 5619
Query: 301 ttggggcttatataaattaatatctacccgcggcaccccccgaa--gaggtgaccgcggg 358
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5618 ttggggcttatataaattaatatctacccgcggcaccccccgaagggaggtgaccgcggg 5559
Query: 359 aaattacttaataaatattaggtaattttatactattatataaatatataatakcttgta 418
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5558 aaattacttaataaatattaggtaattttatactattatataaatatataataacttgta 5499
Query: 419 tagtttaattggttaaaacattcgtctcataagcgaagtatataggttcaagtcccatta 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5498 tagtttaattggttaaaacattcgtctcataagcgaagtatataggttcaagtcccatta 5439
Query: 479 taagtattaaaaatataatattataatangartataatatdkktbkkgcaattctttata 538
|||||||||||||||||||||||||||| || |||||||| | |||||||||||||
Sbjct: 5438 taagtattaaaaatataatattataataagaatataatatatttcttgcaattctttata 5379
Query: 539 aaaattacgttacgaaagtggataataatatataagabtatccgcmaataanacaatgta 598
||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 5378 aaaattacgttacgaaagtggataataatatataagattatccgcaaataatacaatgta 5319
Query: 599 nnanttgcggtaatttattaaataataaccccgcggrctcatcatcctactaaagtgagg 658
| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 5318 ttatttgcggtaatttattaaataataaccccgcggactcatcatcctactaaagt-aga 5260
Query: 659 atgagagccgcgggaaattataaatagtttcccccccccccgcggtctcctacccggtat 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5259 atgagagccgcgggaaattataaatagtttcccccccccccgcggtctcctacccggtat 5200
Query: 719 acaccggtatacaccggtataggtgccgcggggaatataatatwtt 764
||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5199 acaccggtatacaccggtataggtgccgcggggaatataatatatt 5154
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6170
Number of Sequences: 1807
Number of extensions: 6170
Number of successful extensions: 217
Number of sequences better than 1.0e-20: 1
length of query: 764
length of database: 10,358,551
effective HSP length: 16
effective length of query: 748
effective length of database: 10,329,639
effective search space: 7726569972
effective search space used: 7726569972
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)